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catRAPID strength

catRAPID strength

This module computes the interaction strength of a protein-RNA pair with respect to a reference set. Reference sequences have the same lengths of the protein-RNA pair of interest.


Submission reference: 131567

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Protein sequence (FASTA format 50-750 aa)

RNA sequence (FASTA format 50-1200 nt)

Reference Set


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Sample data

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PRC2 complex and Xist RNA - Interaction between the protein subunit EZH2 and the Repeat A region of the long noncoding RNA Xist [Zhao et al., 2008]