Portal Home

catRAPID interactions with large RNAs

We developed two methods that allow fast and quantitative predictions of protein interactions with large RNAs

Global Score
The algorithm has been trained on PAR-/HITS-CLIP interactions (Hafner et al. 2010) and other datasets.

The algorithm has been calibrated on RBP interactomes studied by eCLIP assays (Van Nostrand et al. 2016) and allows high-throughput predictions on long intergenic non-coding RNAs.